Protein ZmbHLH39
ZmbHLH39 is a protein in the bHLH family.
Information
TF Name: ZmbHLH39
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH39
Uniprot ID: B4FJ93
Subgenome: 1

Protein ZmbHLH39

ZmbHLH39 is a protein in the bHLH family.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb301520_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d018967DAPseq no logo sequence fimo position
Zm00001d018967DAPseq no logo sequence fimo position
Zm00001d018967ChIPseq no logo sequence fimo position
Zm00001d018967PChIPseq no logo sequence fimo position

Interactions where ZmbHLH39 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH39 is the target  
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There are 108 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb301520_T001 from maize genome v5

Amino Acid Sequence
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MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
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Nucleotide Sequence
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CTACAGCTTCACACTTCCCCAGCAG...

GRMZM2G162382_T01 from maize genome v3


Related TFome: pUT6791

Amino Acid Sequence
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MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

Nucleotide Sequence
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TCACCGGGCCGTCCCACTGCCCCAG...

GRMZM2G162382_T02 from maize genome v3

Amino Acid Sequence
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MFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR
LQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKAL
CMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

Nucleotide Sequence
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TCACCGGGCCGTCCCACTGCCCCAG...

Zm00001d018967_T001 from maize genome v4

Amino Acid Sequence
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MAGQPPPSGASEDDFLEHFFAFPSAASAGAAGGHAGAGVGGDHPFPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGV
HQPHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

Nucleotide Sequence
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CTACAGCTTCACACTTCCCCAGCAG...

Zm00001eb301520_T002 from maize genome v5

Amino Acid Sequence
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MERLPCCLSFTCVNFHVFFFQLNVLYYNEVFVNSHRVFLSVFSLKPQCVPMQLRRERIAERMRALQELVPNTNKTDRAAM
LDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEKWSTDGTEKQVAKLMEEDI
GAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPNASS

Nucleotide Sequence
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AGGCATATGGCGTGCTGTTTAAGCA...


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